Last Update: 12 February 2002, 10:45:20 EST
MGED IV
Microarrays and Chips: Algorithms and Applications
13-16 February 2002
Hynes Convention Center and
Boston Marriott Copley Place Hotel
in conjunction with the
AAAS Annual Meeting and Science Innovation Exposition
Organized by
Terry Gaasterland, Rockefeller University,
Barbara Jasny, AAAS and Science Magazine
MGED Advisory Board
WORKING GROUPS:
| Alvis Brazma | MIAME |
| Paul Spellman | MAGE |
| Chris Stoeckert | Ontology |
John Quackenbush,
Cathy Ball, and Gavin Sherlock |
Normalization |
Reminder: All MGED 4 registrants will receive with their registrations
a full registration to the AAAS Annual Meeting and Science Innovation Exposition.
This includes admission to all symposia and lectures of the AAAS Meeting, as
well as to the Nanotechnology seminar on February 14-15 and the Genome Seminar
February 16-17. Complete descriptions of AAAS symposia, lectures, and seminars
may be found in the AAAS Meeting Program Book you will receive at registration
or at www.aaasmeeting.org.
Agenda
Wednesday, February 13
3:00pm-
6:00pm | Tutorials: |
|
MAGE (Paul Spellman):
Hynes Convention Center Room 102
|
Data Normalization and Analysis
(John Quackenbush, Gavin Sherlock, Cathy Ball)
Hynes Convention Center Room 103 |
Thursday, February 14
| 8:30am-12:00noon |
Plenary Session
Hynes Convention Center, Ballroom A |
EXPERIMENTAL DESIGN
ISSUES
Terry Gaasterland, Rockefeller University |
DATA FIDELITY ISSUES
| Terry Speed,
U.C. Berkeley |
 |
Statistical interpretation
of microarray data |
|
APPLICATIONS
| Dan Shoemaker,
Rosetta |
|
Gene Discovery and Splice
Form Analysis Using Genomic Tiling Arrays |
| Rick Young, Whitehead
Institute for Biomedical Research |
|
Regulation of gene expression |
| Y. Hayashizaki,
RIKEN |
|
RIKEN mouse gene expression |
| Ali Hemmati-Brivanlou,
Rockefeller University |
|
Regulation of development |
|
| 1:30pm-6:00pm |
Plenary Session
Hynes Convention Center, Ballroom A
|
DATABASE DESIGN
| Jason Goncalves,
Iobion Informatics, LLC |
|
Issues in
designing gene expression database schemas |
|
DATA REPRESENTATION,
DATA EXCHANGE AND DATA MINING
| Alvis Brazma,
EBI |
|
MIAME |
| Paul Spellman,
Berkeley |
|
MAGE |
|
PUTTING MIAME INTO
ACTION: UPDATE ON DATABASES
| Alex Lash*, NCBI |
|
GEO |
| Jaak Vilo, EBI |
|
ArrayExpress |
| Gary Churchill,
the Jackson Laboratory |
|
The Application
of Ratio X Intensity Plots in Microarray Normalization |
| Yoshio Tateno,
National Institute of Genetics |
|
MEDICAL APPLICATIONS
| Todd Colub, Whitehead
Institute, Massachusetts Institute of Technology |
| Tim Aitman, Hammersmith
Hospital, UK |
|
Use of Microarrays
for Identifying Complex Trait Genes |
| Harold Garner,
University of Texas Southwestern Medical Center |
|
Mirror Arrays
for Diagnostics |
|
| 6:30pm |
AAAS
Opening Ceremony |
| 7:00pm |
President's Lecture
| Peter Raven,
President AAAS and Director, Missouri Botanical Garden |
|
Linking People
and Cultures: Where Does Science Fit? |
|
Friday, February 15
| 8:30am-12:30pm |
Plenary Session
Boston Marriott, Grand Ballroom F |
INNOVATIONS IN ARRAY INTERPRETATION
| Win Wong, Harvard
University |
|
Statistical
Methods for filtering noise and variability |
| Vestein Thorsson,
Institute for Systems Biology |
|
Integrated
Analysis of Gene and Protein Expression in a Systematically Perturbed
Metabolic Network |
| Julio Celis,
Danish Center for Human Genome Research |
|
Genes to
proteins |
| Aimee Dudley,
Harvard University Medical School |
| |
Measuring
absolute expression with microarrays using a calibrated reference
sample and an extended signal intensity range |
| Ron Shamir, Tel
Aviv University |
| |
Computational
Expansion of Genetic Networks: Genesys |
| Martin Hoffman,
Lion Biosciences |
| |
Linking the
World of Chemistry to Microarray Informatics |
|
ALTERNATIVE ARRAY TECHNOLOGIES
| Marty Chalfie,
Columbia University |
|
Single-Cell
Expression |
| Ron Breaker,
Yale University |
|
Biosensor
arrays |
|
| 12:00noon |
Posters boards available for
setup
Exhibit Hall B, Hynes Convention Center
The MGED Poster area, to the left
as you enter Exhibit Hall B, will be available for setup of your poster
beginning at 12:30pm and continuing through the afternoon until the start
of the MGED Poster Session at 4:00pm. Consult the Poster and Speaker Abstracts
for your assigned board number. If you intended to present a poster but
do not have an assigned number, the boards numbered higher XX than are
unassigned. You may use one of these.
|
| 1:30pm-3:00pm |
Working group and
breakout sessions |
Normalization
Chairs: John Quackenbush, Cathy Ball
Boston Marriott, Grand Ballroom H |
Ontology
Chairs: Chair: Chris Stoeckert
Boston Marriott, Grand Ballroom J |
| 3:00pm-4:00pm |
Second Session |
|
MIAME
Chair: Alvis Brazma
Boston Marriott, Grand Ballroom
H
|
MAGE
Chair: Paul Spelman
Boston Marriott, Grand Ballroom J |
| 4:00pm-6:30pm |
Posters and reception
Exhibit Hall B, Hynes Convention Center |
| 6:30pm-7:30pm |
AAAS Plenary Address
Grand Ballroom, Sheraton Boston |
| Ismail Serageldin, Director General, Bibliotheca Alexandrina |
| Science and Poverty: Challenges for a Connected World |
|
Saturday, February 16
Plenary Session
Boston Marriott, Grand Ballroom F
Chair: Terry Gaasterland
| 9:00am-10:00am |
Software demos |
| 10:00am-10:45am |
Working Group Summaries |
| 10:45am-11:00am |
Break |
| 11:00am-12:00noon |
MIAME and Beyond |
Post-MGED 4 Meetings
Boston Marriot, Grand Ballroom F
This room will remain open for use by MGED attendees and groups until 5:00pm
for informal meetings and discussions.
| 6:30pm |
AAAS Plenary Session
| Larry Smarr,
Director, California Institute for Telecommunication and Information
Technology and University of California, San Diego |
|
Extending
the Internet with Sensornets: Supporting Science and Emergency Preparedness |
|